The Annotation Group Results tab is shown below:
The Annotation Group Results tab contains the following elements:
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One or more P-Value Plots.
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The y-axis variable is the p-value from the missing genotype by trait test, converted to the -log or -log10 scale if selected in the process dialog. The x-axis plots location of the marker according to the annotation location variable within the annotation group.
A horizontal reference line is drawn as a red, dashed line at the significance level that was specified. For -log or -log10-converted p-values, markers above this line are significant; for p-values on the original scale, markers below the line are significant.
For each value of the Trait Variable, the number of missing genotypes is plotted on the y-axis, and the x-axis plots location of the marker according to the annotation location variable within the annotation group (like the plot above).