All P-Value Plots (Multiple SNP-Trait Association)

The All P-Value Plots tab is shown below:

The All P-Value Plots tab contains the following elements:

•

A set of P-Value Plots

This tab displays the p-value plots from all the annotation plotting groups in a single display. P-values (raw or transformed) are plotted on the y-axis and location is plotted on the x-axis. The horizontal red-dotted line represents the specified significance level.

Note: This tab is named P-Value Plot when either when no Annotation Plotting Group Variable is specified or when there is only one annotation plotting group. In this case, a single p-value plot (or multiple plots if any BY variables are selected) from the analysis is displayed.

See Overlay Plot for more information.