Chromosome

Specify the variable indicating the chromosome.

Note for the JMP Genomics Browser process: The values of this variable must be compatible with those in the Chromosome Color Theme Settings File.

Note for the UCSC Genome Browser Link or Affymetrix Integrated Genome Browser processes: Chromosome number must be in the format chr#, or represented within a single column as 1-22, X, or Y.

To Specify a Chromosome Variable:

8

Specify an Annotation SAS Data Set, Chromosome Text Data Set, Chromosome Text File, or Input SAS Data Set, Text Data Set, or Text File (depending on the process and version).

The Available Variables field is populated with variables from the specified data set.

8

Left-click a variable from the Available Variables field.

8

Click to add the selected variable to the Chromosome field.