Processes | Import | Number of Genotype Probability Columns

Number of Genotype Probability Columns
Specify the number of columns per individual containing genotype probabilities.
If " 2 (AA AB) " is selected, then probability columns for only genotypes AA and AB are included in the genotype probability file, and it is assumed that the probability of genotype BB is 1 - Prob(AA) - Prob(AB).
If " 3 (AA AB BB) " is selected (the default and the appropriate selection for IMPUTE and BEAGLE), then probabilities for all three genotypes are included and the columns do not necessarily have to sum to 1.
To Specify the Number of Genotype Probability Columns: