Output Graphics and Action Buttons | Copy Number | Chromosome Position Plots

Chromosome Position Plots
The Chromosome Position Plots tab is shown below:
Note : This tab is generated when a Chromosome Variable is specified.
The Chromosome Position Plots tab contains the following elements:
A series of p -Value Plots.
There is a separate plot for each set of differences on the selected chromosome . The Y -axis plots p-values : raw p -values are plotted on the left, p -values converted to the -log or -log 10 scale on the right. The X -axis plots location of the marker according to the Position Variable .
Horizontal reference lines, one for the p -values and one for the -log 10 p -values, are drawn as dashed lines at the significance level that was specified. For -log or -log 10 -converted p -values, observations above this line are significant; for p -values on the original scale, markers below the line are significant.
On this plot or any of the other p -value plots, simply mouse-over any of the points on the plot to see the name of the marker. When an annotation accession variable is specified when running the process, you can select a point and click on any of the Annotation action buttons to link directly to the corresponding website to view extensive annotation information about the marker.