Output Graphics and Action Buttons | Genetics | Annotation Group Results (Pleiotropic Association)

Annotation Group Results (Pleiotropic Association)
A portion of the Annotation Group Results tab is shown below:
The Annotation Group Results tab contains the following elements:
A set of P -Value Plots.
When there are multiple annotation groups, there is a separate Annotation Group Results tab for each annotation group. In this example there are two annotation groups, CandGene 1 and CandGene 2 . The CandGene 1 Results tab is shown above.
The y -axis variable is the p-value from the association tests, converted to the -log or -log 10 scale if selected in the process dialog . The x -axis plots location of the marker according to the annotation location variable within the annotation group. A horizontal reference line is drawn as a red, dashed line at the significance level that was specified. For -log - or -log 10 -converted p -values, markers above this line are significant; for p -values on the original scale, markers below the line are significant.
All tests are included in a single plot with a legend displaying the line and point color and marker for each test. A separate plot is created for each trait and for the overall MANOVA test.
If any BY variables were selected, a separate plot is displayed for each BY group .