Parameters | Genetics | Shuffle Markers

Shuffle Markers
Select this option to shuffle markers within linkage groups.
A customized version of the “ripple.seq” function from the OneMap package1 is used to shuffle subsequences of markers.
Note: Markers are shuffled right after the marker ordering is processed but before breaking the linkage groups.
To Shuffle the Markers:

Margarido, G.R.A., Souza, A.P. and Garcia, A.A.F. 2007. OneMap: software for genetic mapping in outcrossing species. Hereditas 144:78-79.