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Life Sciences > References
Publication date: 12/16/2025

References

The following sources are referenced in the Life Sciences book.

Batista, L. G., Mello, V. H., Souza, A., and Margarido, G. (2022). “Genomic Prediction with Allele Dosage Information in Highly Polyploid Species.” Theoretical and Applied Genetics 135(2):723–739.

Botstein, D., White, R. L., Skolnick, M., and Davis, R. W. (1980). “Construction of a Genetic Linkage Map in Man Using Restriction Fragment Length Polymorphisms.” The American Journal of Human Genetics 32:314–331.

Cabreros, I., and Storey, J. D. (2019). “A Likelihood-Free Estimator of Population Structure Bridging Admixture Models and Principal Components Analysis.” Genetics 212:1009–1029.

Endelman, J. B., and Jannink, J. L. (2012). “Shrinkage Estimation of the Realized Relationship Matrix.” G3 2(11):1405–1413.

Hildebrand, C. E., Torney, D. C., and Wagner, R. P. (1992). “Informativeness of Polymorphic DNA Markers.” Los Alamos Science 20:100–102.

Jin, W., Riley, R. M., Wolfinger, R. D., White, K. P., Passador-Gurgel, G., and Gibson, G. (2001). “The Contributions of Sex, Genotype and Age to Transcriptional Variance in Drosophila Melanogaster.” Nature Genetics 29:389–395.

Money, D., Gardner, K., Migicovsky, Z., Schwaninger, H., Zhong, G.-Y., and Myles, S. (2015). “LinkImpute: Fast and Accurate Genotype Imputation for Nonmodel Organisms.” G3 5(11):2383–2390.

Piepho, H. P. (2009). “Ridge Regression and Extensions for Genomewide Selection in Maize.” Crop Science 49:1165–1176.

Su, G., Christensen, O. F., Ostersen, T., Henryon, M., and Lund, M. S. (2012). “Estimating Additive and Non-Additive Genetic Variances and Predicting Genetic Merits Using Genome-Wide Dense Single Nucleotide Polymorphism Markers.” PLOS One 7(9):e45293.

Wang, J., Zhou, Z., Zhang, Z., Li, H., Liu, D., Zhang, Q., Bradbury, P. J., Buckler, E. S., and Zhang, Z.(2018). “Expanding the BLUP Alphabet for Genomic Prediction Adaptable to the Genetic Architectures of Complex Traits.” Heredity 121:648–662.

Weir, B. S. (1979). “Inferences about Linkage Disequilibrium.” Biometrics 35:235–254.

Weir, B. S. (1996). Genetic Data Analysis II. Sunderland, MA: Sinauer Associates.

VanRaden, P. M. (2008). “Efficient Methods to Compute Genomic Predictions.” Journal of Dairy Science 91:4414–4423.

Vitezica, Z. G., Varona, L., and Legarra, A. (2013). “On the Additive and Dominant Variance and Covariance of Individuals within the Genomic Selection Scope.” Genetics 195:1223–1230.

Yu, J., Pressoir, G., Briggs, W. H., Bi, I. V., Yamasaki, M., Doebley, J. F., McMullen, M. D., Gaut, B. S., Nielsen, D. M., Holland, J. B., Kresovich, S., and Buckler, E. S. (2006). “A Unified Mixed-Model Method for Association Mapping That Accounts for Multiple Levels of Relatedness.” Nature Genetics 38:203–208.

Zaykin, D. (2004). “Bounds and Normalization of the Composite Linkage Disequilibrium Coefficient.” Genetic Epidemiology 27:252–257.

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