Life Sciences > Marker Statistics
Publication date: 07/15/2025

Image shown hereMarker Statistics

The Marker Statistics platform provides a way to explore various properties of all biallelic markers in a data set, focused on quality control (QC) and potentially identifying markers to exclude from the analysis.

Figure 3.1 Example Analysis Using the Marker Statistics Platform 

Example Analysis Using the Marker Statistics Platform

Note: The Marker Statistics platform is available only in JMP Pro.

Contents

Overview of the Marker Statistics Platform

Example of Marker Statistics

Launch the Marker Statistics Platform

Required Data Format for the Marker Statistics Platform

The Marker Statistics Report and Options

Levels Table
Counts Table
Result Table
Hardy-Weinberg Equilibrium FDR Logworth Plot
LD Decay Plot

Additional Example of the Marker Statistics Platform

Want more information? Have questions? Get answers in the JMP User Community (community.jmp.com).